Patents, Papers, Parts & Planet
  • Home
  • Paper
  • Methods
  • Results
  • Case Study: Carbon Capture
  • Explorer
  • Reproducibility
  • Slides

On this page

  • Semantic Space Explorer
  • Geographic View
  • Report an issue

Explorer

This page hosts the two main interactive visualizations. Both are rendered client-side using precomputed data files, so they work on GitHub Pages without any server.

Semantic Space Explorer

Explore all artifacts (papers, patents, iGEM projects, and parts) in a shared 2D semantic space. Each point is one artifact. Points that are close together are semantically similar.

Controls:

  • Filter by artifact type (papers / patents / projects / parts)
  • Highlight the carbon-capture case study subset
  • Hover a point to see the title and year
  • Click a point to see full details

Geographic View

City-level map showing where synthetic biology activity is concentrated. Bubble size reflects total artifact count; hover for a city breakdown.

Source Code
---
title: "Explorer"
format:
  html:
    page-layout: full
---

This page hosts the two main interactive visualizations.
Both are rendered client-side using precomputed data files, so they work
on GitHub Pages without any server.

## Semantic Space Explorer

Explore all artifacts (papers, patents, iGEM projects, and parts) in a shared
2D semantic space. Each point is one artifact. Points that are close together
are semantically similar.

**Controls:**

- Filter by artifact type (papers / patents / projects / parts)
- Highlight the carbon-capture case study subset
- Hover a point to see the title and year
- Click a point to see full details

```{=html}
<script src="https://cdn.plot.ly/plotly-2.27.0.min.js"></script>
<div id="semantic-explorer" style="width:100%; height:600px; border:1px solid #ddd; border-radius:4px;"></div>
<script src="assets/js/explorer.js"></script>
```

## Geographic View

City-level map showing where synthetic biology activity is concentrated.
Bubble size reflects total artifact count; hover for a city breakdown.

```{=html}
<div id="geo-explorer" style="width:100%; height:520px; border:1px solid #ddd; border-radius:4px; margin-top:2em;"></div>
<script src="assets/js/geo.js"></script>
```

CSH Thesis Project — Synthetic Biology Innovation

 
  • Report an issue